APD Workshop: R basics for paleoecologists

February 17, 2023
sji15

Chris Kiahtipes will be presenting a, African Pollen Database (APD), practical tutorial about working with paleoecological data in R for beginners! Please join us Wed, February 22 at 9am EST. Please email chris.kaihtipes@gmail.com for the zoom link.

Also, if you are interested in joining, please follow the set-up guide below before the start of the workshop in order to make sure you are ready to go and follow along in real-time during the workshop!

Data workshops in R for paleoecologists

February 10, 2023
sji15

The African Pollen Database community is hosting a series of workshops including practical data tutorials and discussions to help paleoecologists working in Africa integrate these data into research and teaching.

Our theme for Spring 2023 is “using R to understand African paleoecology”, and the schedule is posted here.

Our first workshop will be February 22 at 9am EST. Chris Kiahtipes will be provided a guided tutorial that can be followed live to help you use R and RMarkdown to develop reproducible research workflows for pollen data. This will be ~1 hour. Please register in advance by emailing Chris (chris.kiahtipes@gmail.com) to receive the zoom link and a guide to setup your workspace ahead of the workshop.

To see our launch meeting from February 8 that includes a tour of the African Pollen Database on the Neotoma Paleoecology Database, watch this video.

APD Workshop series launch!!!

February 3, 2023
sji15

Interested in African paleoecology? Want to incorporate African pollen data into your research or teaching?

The African Pollen Database (APD) has been updated, and the Neotoma Paleoecology Database now contains over 200 APD records.   Many community members filled out a recent survey to help us format of our meetings in order to start focusing on helping people use APD data for research and teaching!

This Wednesday, February 8 at 9am EST, we will announce our finalized schedule for the next few months during a short meeting and provide a short (10 minute) walkthrough of the African Pollen Database on the Neotoma Paleoecology Database. Join us live for this short meeting at 9am EST time or check out the recording afterwards, which we will post here.

What: APD Workshop series launch meeting

When: February 8, 9am EST

Where: zoom, for link, email Sarah Ivory

Who: everyone interested in African paleoecology

APD Workshop Series: R, Databases, and You!

January 17, 2023
sji15

Interested in African paleoecology? Want to incorporate African pollen data into your research or teaching?

If you read nothing else, please take this survey before January 25!

The African Pollen Database (APD) has been relaunched, and the Neotoma Paleoecology Database now contains over 200 APD records.   Data stewards working with APD and Neotoma have been meeting regularly for the last two years to upload data, but we are now changing the format of our meetings in order to start focusing on helping people use APD data for research and teaching!

We are developing a schedule of practical tutorials on APD data workflows in R, using Rneotoma, and a few other topics to take place over next few months (see this video for general info).

This is open to anyone interested in African paleoecology (students, researchers, teachers, etc)!  If you or your students might be interested in taking part in one or all of these, please take this very brief survey by January 25 to let us know.  Also if you have other students or researchers you think should get this email, let Sarah Ivory (sji15@psu.edu) or Chris Kiahtipes (chris.kiahtipes@gmail.com) know.

Mapping Ancient Africa: Video of Seminar 5

April 12, 2022
WDG

The fifth Mapping Ancient African project took place on Monday 11 April 2022 and focused on the African Pollen Database and past vegetation change in Africa.

The seminar was delivered by Sarah Ivory (Penn State University), Rahab Kinyanjui (National Museums of Kenya), and Lynne Quick (Nelson Mandela University). The seminar covers the principles behind and the working of the African Pollen Database (why make data openly available?) and the latest advances in eastern and southern Africa.

For more about the African Pollen Database check out:

You can watch the seminar now on the Ecology of the Past YouTube channel. Seminar details can be found here.

PoA35: Perspectives

December 24, 2021
WDG

The festive period blog post related to the recent volume of Palaeoecology of Africa (published entirely open access online) picks out the four Perspective articles. We included Perspective articles within the volume to place the volume in context and showcase some topical ideas, with the overall objective of stimulating further debate on past environmental change in Africa.

The opening two papers of the volume are both Perspectives. Louis Scott opens the volume with a short history of the Palaeoecology of Africa series. He sketches out the rich and varied history of the publication which, commenced in 1966 as a collection of eight reports (van Zinerden Bakker 1966), includes seven conference proceedings, and has been edited at various times by Eduard Meine van Zinerden Bakker, Joey Coetzee, Klaus Heine and currently Jürgen Runge. The second article, Lézine et al., tracks the rise and revival of the “African Pollen Database” (APD) from its formation in 1996, through to its decline in 2007, and up to its re-initiation in 2019 from which this volume of PoA has sprung. Personally, I think the huge enthusiasm shown to participate in this volume and to contributing to collaborative initiatives like the APD, demonstrate the strength of the field and can only bode well for future research.

The other two Perspective papers showcase nicely some of the motivation behind the enthusiasm for palaeoecological research. Lynne Quick focuses in on the hyper-diverse Cape Floristic Region of southern Africa and what records of past vegetation and climate change can tell us to reveal these origins and assist in the conservation and management of this ecological wonder today. The final perspective, by Lindsey Gillson, rounds off the volume by thinking more broadly about how palaeoecological research can be utilised in the development of conservation policy in Africa. She focuses particularly on how these records can provide insights into drivers of change in the past (climate, fire, and herbivory) and how this can then be used to guide conservation and enrich our understanding how the landscape we see in Africa today came to be.

To find out more download all the articles for free:

Continue Reading

PoA 35: Research Articles

December 15, 2021
WDG

The second in my series highlighting papers in the recent volume of Palaeoecology of Africa (published entirely open access online) focuses on the research articles. The research articles make up the ‘guts’ of the volume, comprising 10 of the 24 papers. Three of these are from western Africa (Dinies et al.; Gosling et al.; Lemonnier & Lézine), two from eastern Africa (Githumbi et al.; Kinyanjui et al.), two from central Africa (Richards; Gaillard et al.), and three from southern Africa (Chevalier et al.; Hill & Finch, Hill et al.). These research articles present new data and key insights into past environmental change in Africa, which fall into two broad categories, providing information on: (i) how we can extract information from pollen data sets, and (ii) the processes operating to drive vegetation.

Continue Reading

PoA 35: Data papers

December 2, 2021
WDG

The recently published volume of the Palaeoecology of Africa series contains a number of different types of papers: research articles, reviews, perspectives and data papers. One of the key reasons I was motivated to become involved in the project was to help mobilise palaeoecological data from Africa towards open access datasets (African Pollen Database, Neotoma). To hopefully get greater recognition to the great work done over the years and to help facilitate synthetic work that will provide a greater understanding of spatial variance in past climate change. Ultimately, four short data papers were included in the volume: an enhanced c. 16,000 year pollen record from the Bale Mountains in Ethiopia (Gil-Romera et al. 2021), two pollen and charcoal record from the southern Cape Coast in South Africa, c. 3200 and 650 years long respectively (du Plessis et al. 2021a; du Plessis et al. 2021b), and a c. 700 year long record from Madagascar (Razanatsoa et al. 2021). The records provide new insights in to landscape scale environmental change driven by both humans and climate. To find out more check out the open access articles and the data at:

Continue Reading

Mapping Ancient Africa: Kick off meeting

October 1, 2021
WDG

The first meeting of the, INQUA funded, Mapping Ancient Africa project will take place on the 14 and 15 of October 2021 with face-to-face meetings at four locations (Nairobi, Kenya; Port Elisabeth, South Africa; Potsdam, Germany; Portland, Oregon, USA) being linked up online.

For further information visit the project pages: https://ecologyofthepast.info/mapping-ancient-africa/

Blog at WordPress.com.