Come study with us! New and improved Ecology & Evolution masters track within the MSc Biological Sciences at the University of Amsterdam
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Ecology & Evolution
November 24, 2017
Environments Through Time – weeks 2 & 3
November 19, 2017
Britte reconfiguring the chronology for Lake Pata
The second and third weeks of the Environments Through Time course at the University of Amsterdam has focused on obtaining practical experience of developing chronologies, analyzing multi-variate data-sets, and conducting time series analysis. The focus of the course has been on Quaternary environmental change, however, the skills learnt can be applied to almost any time-scale so long as you have time control points you want to tie together, and multiple things you can track changing through that time.
Over the two week period the students worked on a previously published paper that they had selected that contains: (i) chronological information (at least 3 control points), and (ii) multiple variables that change through the time series (at least 9 variables). In week two they deconstructed the chronologies and generated their own revised versions. For example students have (re-)calibrated radiocarbon dates, made different decisions on dates to include/exclude, and used different approaches to constructing the age vs. depth model, e.g. contrasting linear point-to-point vs. Bayesian methodologies. In week three they have taken the data-set(s) associated with their paper and re-evaluated it in light of the revised chronologies using cluster analysis, ordination techniques, and wavelets.
The joy of wavletes
Through this exercise students have gained experience of how to critically assess scientific literature and gained an appreciation of where re-analysis of data-sets can (and cannot) make a difference. Personally I have be delighted with the high level of engagement and enthusiasm for the material and have been excited to have a chance to delve into literature that I would not otherwise be aware of.
For more information on this course see: Environments Through Time – week 1
Environments Through Time – week 1
November 3, 2017
Me teaching human impacts on environmental change…
The first, ever, week of the Environments Through Time course at the University of Amsterdam has just finished. The course sits within the MSc Biological Sciences (Ecology & Evolution) and MSc Earth Sciences (Geo-ecosystem Dynamics) but is also avaliable to other masters students. In the first week we have thought about four main topics:
- Scales of change (ecological, geological, and human).
- Humans as drivers of environmental change.
- Extra-terrestrial forcing of environmental change.
- Earth system feedbacks.
The week was completed with each student giving a three (3) minute presentation of their favourite paper. The papers presented ranged from the extinction of giant sharks, through forest-savannah transitions, to how climate change thwarted Ghengis Kahn. Next week we continue by disecting how chronologies are constructed.
The Enviornments Through Time course is taught by: William Gosling, Crystal McMichael, and Milan Teunissen van Manen.
Exploring the Llanos de Moxos, Bolivia
November 1, 2017
By Crystal McMichael
The Llanos de Moxos in Bolivia is an area the size of England that has one of the highest densities of archaeological sites in the Amazon basin. I travelled there for the first time earlier this month for the fourth International Meeting of Amazonian Archaeology. As the airplane crossed from the Andes into the Amazon plains, I could tell this was a very different ‘Amazonia’ compared with the forests that I know from Peru, Ecuador, and western Brazil. The Llanos de Moxos is a seasonally flooded savanna and it was so…open! I immediately realized that the perception of ‘Amazonia’ varies widely among individuals, and I think that is one of the reasons why those of us who study the human history of Amazonia tend to disagree so frequently.
An undergraduate eye-view of an Andean lake-coring expedition
August 25, 2017
Part 2: Progresso
by Molly Kingston (a BSc Biological Sciences student at Florida Institute of Technology, taking part in an expedition lead by Prof. Mark Bush)
With a fresh set of clothes and a shower after almost a week without one, it was time to set off for the next lake, Progresso.
An undergraduate eye-view of an Andean lake-coring expedition
August 23, 2017
Part 1: Huayabamba
by Molly Kingston (a BSc Biological Sciences student at Florida Institute of Technology, taking part in an expedition lead by Prof. Mark Bush)
When I first heard about this class in Peru, I had no idea that I was going to experience so much in such a short period. Our goal was to visit two lakes in Peru and raise sediment cores for paleoecology. The first lake that we went to was Laguna Huayabamba, which sits at about 3250 m elevation in the La Libertad region of the Peruvian Andes.
However, getting to this lake was no easy task. Before the hike even started, we had to obtain the necessary permits and permission from the local people. After several days of visiting different town officials and waiting for approval, we could set out on our adventure.
Field work in Ecuador
July 27, 2017
IBEDs Crystal McMichael hard at work sampling sediments in the Andes
Insights into recent field work in Ecuador by a team lead by Crystal McMichael can be found in a recent blog from our collaborators at the Instituto Geofisico, Escuela Politecnica Nacional, Quito (Ecuador).
Trabajo colaborativo entre Volcanólogos y Palenólogos potenciará el conocimiento sobre el Paleoclima en el Valle de Latacunga en los últimos 20 mil años by Patricia Mothes
Success for BSc project students
July 18, 2017
Many BSc students undertook our “Palaeoecology” course prior to choosing to do a research project with us.
This year 15 (fifteen!) bachelors students completed their research projects in palaeoecology based within the Department of Ecosystem & Landscape Dynamics at the University of Amsterdam. The students had a variety of backgrounds with the majority coming from the BSc Biology and the BSc Future Planet Studies programs.
Each project was set up to test a particular ecological or biogeographic hypothesis. Investigations included the exploration of the role of humans in modifying ecosystems in Amazon, the nature of the pre-farming landscape in the the Netherlands, and how to chemically identify fossil charcoal. In undertaking their projects individual students had the opportunity to variously develop skills in microscopy, spatial modelling, or analytical chemistry. The high quality of the data produced means that hopefully many of these data sets can be used in future scientific publications. Well done to all!
If you are interested in conducting a similar project (at any academic level) with us please do not hesitate to get in contact. For further details of ongoing research within the Department of Ecosystems & Landscape Dynamics visit our web pages by clicking here.
A fortnight of palaeoecology at the University of Amsterdam!
June 27, 2017
BSc student Henk Cornelissen presents his thesis work on identifying charcoal characteristics that represent specific fire parameters, such as burn temperature. Photo: C. McMichael
Wimbledon tennis fortnight is on its way, but we’ve had our own palaeoecology fortnight here at the Institute for Biodiversity & Ecosystem Dynamics at the University of Amsterdam. We’ve seen seminars on reconstructing past landscapes and climates on timescales of decades to millions of years, and on spatial scales ranging from single sites to the entire Earth. Our presenters included our BSc students, MSc students, PhD candidates, faculty members, guest researchers, and even an internationally known palaeoclimatologist and contributor to the IPCC (Intergovernmental Panel on Climate Change) reports!
BSc student Isa Mulder presents her thesis on reconstructing glacial-aged fire histories from the Andes. Photo: C. McMichael
We began with a three-day series of presentations from our BSc students in the Future Planet studies program. William Gosling and I had four students that presented their final theses. We continued with a seminar series organized by the Palynologische Kring (the Dutch palynology society). Eric Grimm, a guest researcher at UvA, presented a high resolution record of hydrological variability, vegetation, and fire from the Great Plains of the United States. Guest researcher Carina Hoorn showed us how the Amazon River formed, and the associated plant turnover that occurred during the Neogene. PhD student Keith Richards explained to us why the Arctic seal became land-locked in the Caspian Sea over 2.6 million years ago. PhD student Suzette Flantua presented a multi-proxy approach to exploring the biogeographic history of the Andes Mountains. She came back the following day to present her PhD thesis entitled, “Ecosystems in Pleistocene Latin America”. And we are happy to report that Suzette is now Dr. Flantua!!
Suzette Flantua highlights the work in her PhD thesis. Congratulations Suzette! Photo: C. McMichael
Dr. William Gosling and Prof. Jonathan Overpeck discuss the future of palaeoecology and upcoming collaborations. Photo: C. McMichael
Professor Jonathan Overpeck from the University of Michigan also delivered a seminar entitled “New paleoclimatic perspectives on the future of terrestrial systems: bigger change, higher confidence?” Our society faces serious challenges involving current and future rates of climate change, and this seminar highlighted the importance of palaeoecology for assessing how the planet will respond to these changes.
Our presenters included males and females from multiple countries at an array of career stages. I am glad to have been a part of this fortnight, and I am glad that our current students got to see such a diverse integration of people and palaeoecology. My hope is at least one of these students has been inspired by these seminars, and will develop the same passion for palaeoecology as what we’ve seen here over the last two weeks.
British Ecological Society annual meeting 2016
December 15, 2016
The British Ecological Society (BES) annual meeting for 2016 has come to an end. It has seemed like a long week (and it is only Thursday) because it has been so action packed. For me it commenced on Sunday when I helped out with the introduction session for early career researchers (MSc, PhD and post-docs), and the marathon council meeting. I think the length, and intensity, of the council meeting highlighted the need for the structural review that our president, Sue Hartley, has just initiated. The main program commenced on Monday and has been mainly a mix of workshops, posters and talks, with a side order of special interest group meetings, carol singers, and a gala dinner.
I would like to highlight two of the scientific talks that stuck in my head in particular:
- Steven Sylvester “Shifting perspectives on natural ecosystems in the high Andes”; showed how remote regions of the high Andes may still contain the vestigaes of ‘pristine’ ecosystems dating from before human arrival, and
- Stefano Allesina “Higher-order interactions stabilize dynamics in a generalized rock-paper-scissors game”; showed (theoretically) how ecosystem complexity plays a role in ecosystem stability.
An excellent and exciting meeting was capped for me by my PhD student Nick Loughlin for being awarded the BES Public Engagement award! Well done Nick (@PalaeoNick).
REFERENCES
Sylvester, S.P., Sylvester, M.D.P.V. & Kessler, M. (2014) Inaccessible ledges as refuges for the natural vegetation of the high Andes. Journal of Vegetation Science 25, 1225-1234. DOI: 10.1111/jvs.12176
Ecology of the past 